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Multi-Dimensional Viewer (MDV) Documentation

Summary​

Multi-Dimensional Viewer (MDV) enables the user to visually inspect and query the underlying data from omics experiments such as scRNA-seq, scATAC-seq, spatial transcriptomics, and spatial proteomics. Users can upload tabular data (.csv/.tsv), AnnData (.h5, .h5ad), or image files (.ome.tiff) and interactively filter, sort, and visualize them.

Each MDV project consists of multiple Views, which contain tables of data that can be queried and visualized. Views can be thought of as dynamic slides in a presentation, helping users tell a story with their data using various visualization tools.

Multi-Dimensional Viewer

Key Features​

  • Large assortment of interactive charts/widgets such as spreadsheets, genome browser, image viewer and 3d scatter plot
  • Multiple views of the same data
  • Charts/Widgets can pop out into separate windows to take advantage of multiple screens
  • Multiple data sources (tables) can be loaded and links defined between them
  • Data can be added and/or modified by the user
  • Diverse range of data sources (API calls, static files) can be used by implementing custom data loaders

Getting Started​

  1. Create a project by uploading your data
  2. Learn about Views and Visualization
  3. Explore our comprehensive Chart Types
  4. Check out Permissions and Sharing

Need Help?​